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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1279target gene predictions
  • 952histone modifications
  • 896chromatin state
  • 825accessible chromatin
  • 823candidate regulatory elements
  • 786binding sites
  • 638gene expression
  • 164eQTL
  • 156differential activity
  • 125variant allelic effects
  • 76Fine-mapped variants
  • 11caQTL
  • 5hQTL
  • 5sQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2391September, 2022
  • 1684February, 2021
  • 373May, 2021
  • 359February, 2024
  • 283November, 2021
  • 269June, 2020
  • 269September, 2023
  • 145May, 2020
  • 119March, 2020
  • 117August, 2021
  • 100January, 2022
  • 89October, 2022
  • 79January, 2020
  • 63March, 2023
  • 55February, 2020
  • 54January, 2021
  • 46May, 2022
  • 37November, 2022
  • 31February, 2023
  • 30March, 2024
  • 30May, 2024
  • 28August, 2017
  • 28March, 2025
  • 16April, 2020
  • 14November, 2019
  • 12October, 2019
  • 9May, 2019
  • 8April, 2019
  • 8August, 2018
  • 1August, 2020
  • 1August, 2022
  • 1January, 2018
  • 1July, 2020
  • 1September, 2018
Available data
  • 4939bed bed3+
  • 3501tsv
  • 828bed bed9
  • 491bigWig
  • 101txt
  • 38bigBed bed9
  • 34bed bed9+
  • 24csv
  • 15bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9342Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2379EpiMap
  • 1783ChIP-Atlas
  • 576DGA
  • 466AMP
  • 412T1D
  • 339T2DKP
  • 266KPMP
  • 218BLUEPRINT
  • 1744DN
  • 141GTEx
  • 135 T2DKP
  • 108ENCODE
  • 104T2D
  • 95eQTLCatalogue
  • 90CMDGA
  • 58HPAP
  • 31STARNET
  • 20FNIH_projects-heart
  • 12ROADMAP
  • 10FNIH_projects-liver
Biosample type
  • 4751tissue
  • 2175cell line
  • 2080primary cell
  • 379in vitro differentiated cells
  • 3stem cell
Organ
  • 2887vasculature
  • 2837bodily fluid
  • 2828blood
  • 2828blood vessel
  • 2654vein
  • 906epithelium
  • 568kidney
  • connective tissue
  • 416brain
  • 302musculature of body
  • 266pancreas
  • 250lung
  • 231intestine
  • 223heart
  • 196limb
  • 185embryo
  • 163skin of body
  • 154liver
  • 138large intestine
  • 120extraembryonic component
  • 100eye
  • 91stomach
  • 88adipose tissue
  • 78bone element
  • 78uterus
  • 75artery
  • 73mammary gland
  • 66small intestine
  • 64prostate gland
  • 60placenta
  • 59adrenal gland
  • 49lymph node
  • 46penis
  • 46ureter
  • 41gonad
  • 40thymus
  • 35esophagus
  • 35spinal cord
  • 25spleen
  • 22lymphatic vessel
  • 22nerve
  • 21testis
  • 20lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 17skeleton
  • 15mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10breast
  • 9urinary bladder
  • 8tongue
  • 8vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 8757AMP
  • 283ENCODE
  • 266KPMP
  • 58T1D
  • 16LungMap
  • 9community
  • 1ITG
Genome assembly (visualization)
  • 5809hg19
  • 1779GRCh38
  • 2hg18
organ_slims!
  • connective tissue
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

9390 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
histone modifications
chromatin state
accessible chromatin
candidate regulatory elements
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart20121519132
kidney1421610141711
stomach2111931911
brain163182161121
cell line
HeLa-S355331
A549191181182
H1-hESC39111128
K5622317162
EndoC_BH11181831
primary cell
monocyte286181154211
CD8-positive, alpha-beta T cell530143
endothelial cell7115329122
common myeloid progenitor, CD34-positive141313
B cell1086112
in vitro differentiated cells
neural progenitor cell51541047
hematopoietic multipotent progenitor cell1011011011
embryonic stem cell11561
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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