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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 949histone modifications
  • 891chromatin state
  • 815candidate regulatory elements
  • 774binding sites
  • 701accessible chromatin
  • 450target gene predictions
  • 183eQTL
  • 100variant allelic effects
  • 84Fine-mapped variants
  • 65differential activity
  • 11caQTL
  • 7sQTL
  • 6gene expression
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2302February, 2021
  • 791September, 2022
  • 282May, 2021
  • 264June, 2020
  • 243February, 2024
  • 206November, 2021
  • 140May, 2020
  • 115March, 2020
  • 106January, 2022
  • 95October, 2022
  • 64August, 2021
  • 58January, 2020
  • 53September, 2023
  • 47May, 2022
  • 38March, 2025
  • 36January, 2021
  • 32August, 2017
  • 31May, 2024
  • 29November, 2022
  • 25February, 2020
  • 20February, 2023
  • 13March, 2023
  • 13November, 2019
  • 12April, 2020
  • 9May, 2019
  • 9October, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 3953bed bed3+
  • 2831tsv
  • 819bed bed9
  • 370bigWig
  • 38bigBed bed9
  • 34bed bed9+
  • 2bigBed narrowPeak
  • 2csv
  • 1bam
Organism
  • 7643Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1767ChIP-Atlas
  • 880ENCODE
  • 785EpiMap
  • 349DGA
  • 300T1D
  • 281AMP
  • 254T2DKP
  • 181BLUEPRINT
  • 1744DN
  • 107T2D
  • 101eQTLCatalogue
  • 96GTEx
  • 89 T2DKP
  • 70CMDGA
  • 48KPMP
  • 43STARNET
  • 20FNIH_projects-heart
  • 12ROADMAP
  • 9FNIH_projects-liver
  • 4HPAP
Biosample type
  • 4240tissue
  • 1940cell line
  • 1195primary cell
  • 310in vitro differentiated cells
  • 4stem cell
Organ
  • 2830vasculature
  • 2807bodily fluid
  • 2801blood
  • 2786blood vessel
  • 2653vein
  • epithelium
  • 345connective tissue
  • 328brain
  • 300kidney
  • 233musculature of body
  • 176intestine
  • 171pancreas
  • 170lung
  • 164heart
  • 151embryo
  • 147limb
  • 134skin of body
  • 116liver
  • 106large intestine
  • 90eye
  • 80extraembryonic component
  • 73uterus
  • 71stomach
  • 70adipose tissue
  • 59artery
  • 59mammary gland
  • 57bone element
  • 51prostate gland
  • 46lymph node
  • 46small intestine
  • 44adrenal gland
  • 44penis
  • 41placenta
  • 38ureter
  • 32gonad
  • 29esophagus
  • 27thymus
  • 26spinal cord
  • 21spleen
  • 17lymphatic vessel
  • 17nerve
  • 17testis
  • 14ovary
  • 14thyroid gland
  • 13lymphoid tissue
  • 12bronchus
  • 12pituitary gland
  • 12skeleton
  • 11bone marrow
  • 10mouth
  • 8breast
  • 5tongue
  • 5trachea
  • 5urinary bladder
  • 5vagina
  • 2nose
Project
  • 7369AMP
  • 206ENCODE
  • 48KPMP
  • 40T1D
  • 12LungMap
  • 11community
  • 5ITG
Genome assembly (visualization)
  • 4808hg19
  • 1666GRCh38
  • 4hg18
organ_slims!
  • epithelium
software_used.software.name!
  • r
BIOSAMPLE
TYPE

7691 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
chromatin state
candidate regulatory elements
binding sites
accessible chromatin
target gene predictions
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
sQTL
gene expression
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart121181512
stomach11921321
kidney2161511011
brain318131221
cell line
HeLa-S332152
H1-hESC112138
K5621712117
A5491183211
breast cancer cell119
primary cell
monocyte8611824121
CD8-positive, alpha-beta T cell301745
fibroblast3116426
macrophage31239311
common myeloid progenitor, CD34-positive13141
in vitro differentiated cells
neural progenitor cell1541101
hematopoietic multipotent progenitor cell110911
adipocyte162144
embryonic stem cell15161
T-cell acute lymphoblastic leukemia53
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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