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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1550candidate regulatory elements
  • 1255target gene predictions
  • 971histone modifications
  • 867chromatin state
  • 863accessible chromatin
  • 810binding sites
  • 487gene expression
  • 185eQTL
  • 125variant allelic effects
  • 116differential activity
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2402February, 2021
  • 2286September, 2022
  • 389May, 2021
  • 377February, 2024
  • 330November, 2021
  • 274June, 2020
  • 146September, 2023
  • 136May, 2020
  • 105January, 2022
  • 100August, 2021
  • 99October, 2022
  • 98March, 2020
  • 75January, 2020
  • 70March, 2023
  • 56January, 2021
  • 55February, 2020
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 28March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 8May, 2019
  • 7April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5746bed bed3+
  • 3325tsv
  • 792bed bed9
  • 510bigWig
  • 38bigBed bed9
  • 34bed bed9+
  • 26csv
  • 21txt
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9941Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2274EpiMap
  • 1822ChIP-Atlas
  • 875ENCODE
  • 531AMP
  • 473DGA
  • 420T1D
  • 403T2DKP
  • 219BLUEPRINT
  • 1744DN
  • 170 T2DKP
  • 149GTEx
  • 141KPMP
  • 110T2D
  • 100CMDGA
  • 100eQTLCatalogue
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5001tissue
  • 2309cell line
  • 2208primary cell
  • 467in vitro differentiated cells
  • 2stem cell
Organ
  • 2912vasculature
  • 2859bodily fluid
  • 2848blood
  • 2847blood vessel
  • 2658vein
  • 958epithelium
  • kidney
  • 478connective tissue
  • 465brain
  • 379musculature of body
  • 310lung
  • 287intestine
  • 276pancreas
  • 254heart
  • 244limb
  • 214embryo
  • 204skin of body
  • 173large intestine
  • 162liver
  • 146extraembryonic component
  • 118stomach
  • 109eye
  • 98adipose tissue
  • 89bone element
  • 87mammary gland
  • 83small intestine
  • 83uterus
  • 79artery
  • 78prostate gland
  • 73placenta
  • 72adrenal gland
  • 64penis
  • 64ureter
  • 62lymph node
  • 49gonad
  • 48thymus
  • 44esophagus
  • 43spinal cord
  • 33spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23thyroid gland
  • 22ovary
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10vagina
  • 9urinary bladder
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9421AMP
  • 330ENCODE
  • 141KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6588hg19
  • 1804GRCh38
  • 4hg18
organ_slims!
  • kidney
software_used.software.name!
  • nospecificsoft_customcode
BIOSAMPLE
TYPE

9989 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201215132
stomach4021119311
brain291631821121
lung33161611
cell line
HeLa-S355531
A549211911812
H1-hESC13911128
K5627231712
MCF-7962513
primary cell
monocyte286181154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530143
B cell1710862
endothelial cell3711529122
in vitro differentiated cells
neural progenitor cell54154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4616411
embryonic stem cell1561
cardiomyocytes11
stem cell
H1-hESC1
undifferentiated ESC (H9 cell line)1
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