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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 971histone modifications
  • 867chromatin state
  • 863accessible chromatin
  • 810binding sites
  • 792candidate regulatory elements
  • 524target gene predictions
  • 182eQTL
  • 125variant allelic effects
  • 84Fine-mapped variants
  • 74differential activity
  • 15gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2318February, 2021
  • 771September, 2022
  • 330November, 2021
  • 311February, 2024
  • 299May, 2021
  • 274June, 2020
  • 136May, 2020
  • 117March, 2020
  • 105January, 2022
  • 99October, 2022
  • 59August, 2021
  • 59September, 2023
  • 58January, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 25February, 2020
  • 19April, 2020
  • 15March, 2023
  • 14November, 2019
  • 14October, 2019
  • 8May, 2019
  • 7April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 4253bed bed3+
  • 2847tsv
  • 792bed bed9
  • 510bigWig
  • 38bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 7934Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1822ChIP-Atlas
  • 852ENCODE
  • 758EpiMap
  • 422AMP
  • 403DGA
  • 399T2DKP
  • 326T1D
  • 181BLUEPRINT
  • 1744DN
  • 130 T2DKP
  • 110T2D
  • 100CMDGA
  • 100eQTLCatalogue
  • 96GTEx
  • 54KPMP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 4118tissue
  • 1949cell line
  • 1584primary cell
  • 325in vitro differentiated cells
  • 4stem cell
Organ
  • 2830vasculature
  • 2807bodily fluid
  • 2801blood
  • 2786blood vessel
  • 2653vein
  • 591epithelium
  • 345connective tissue
  • 328brain
  • kidney
  • 233musculature of body
  • 176intestine
  • 171pancreas
  • 170lung
  • 164heart
  • 151embryo
  • 147limb
  • 134skin of body
  • 116liver
  • 106large intestine
  • 90eye
  • 80extraembryonic component
  • 73uterus
  • 71stomach
  • 70adipose tissue
  • 59artery
  • 59mammary gland
  • 57bone element
  • 51prostate gland
  • 46lymph node
  • 46small intestine
  • 44adrenal gland
  • 44penis
  • 41placenta
  • 38ureter
  • 32gonad
  • 29esophagus
  • 27thymus
  • 26spinal cord
  • 21spleen
  • 17lymphatic vessel
  • 17nerve
  • 17testis
  • 14ovary
  • 14thyroid gland
  • 13lymphoid tissue
  • 12bronchus
  • 12pituitary gland
  • 12skeleton
  • 11bone marrow
  • 10mouth
  • 8breast
  • 5tongue
  • 5trachea
  • 5urinary bladder
  • 5vagina
  • 2nose
Project
  • 7501AMP
  • 330ENCODE
  • 60T1D
  • 54KPMP
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5083hg19
  • 1804GRCh38
  • 4hg18
organ_slims!
  • kidney
software_used.software.name!
  • r
BIOSAMPLE
TYPE

7982 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
chromatin state
accessible chromatin
binding sites
candidate regulatory elements
target gene predictions
eQTL
variant allelic effects
Fine-mapped variants
differential activity
gene expression
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart121511812
stomach11932121
brain318211321
liver29416381211
cell line
HeLa-S331252
H1-hESC111238
K5621712117
A5491181231
breast cancer cell119
primary cell
monocyte8618124121
CD8-positive, alpha-beta T cell301475
endothelial cell115237122
fibroblast1613426
macrophage12339311
in vitro differentiated cells
neural progenitor cell1541011
hematopoietic multipotent progenitor cell110119
adipocyte164124
embryonic stem cell15611
T-cell acute lymphoblastic leukemia53
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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