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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 56ChIP-seq
Assay category
  • 56DNA binding
Target of assay
  • 914histone
  • 914histone modification
  • 459broad histone mark
  • 454narrow histone mark
  • 235control
  • 176transcription factor
  • 56RNA binding protein
  • 13chromatin remodeller
  • 7recombinant protein
  • 5nucleotide modification
  • 3other context
  • 3other post-translational modification
Date released
  • 11October, 2018
  • 8August, 2017
  • 6January, 2019
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4June, 2019
  • 3November, 2017
  • 2December, 2018
  • 2November, 2018
  • 1November, 2019
Available data
  • 50bigWig
  • 49bed narrowPeak
  • 46bam
  • 38bigBed narrowPeak
  • 32fastq
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 2bed bed3+
Organism
  • 56Homo sapiens
Biosample type
  • 26tissue
  • 11cell line
  • 10primary cell
  • 9in vitro differentiated cells
Organ
  • liver
  • 11heart
  • 10blood
  • 10bodily fluid
  • 10connective tissue
  • 9pancreas
  • 8epithelium
  • 5adipose tissue
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 3kidney
  • 1artery
  • 1eye
Project
  • 56AMP
Genome assembly (visualization)
  • 49GRCh38
  • 45hg19
Lab
  • 46AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 1missing controlled_by
organ_slims!
  • liver
BIOSAMPLE
ASSAY

56 results

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Clear Filters
ChIP-seq
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
islet of Langerhans2
cell line
GM1287810
EndoC_BH11
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
in vitro differentiated cells
embryonic stem cell5
adipocyte4
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