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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 176ChIP-seq
Assay category
  • 176DNA binding
Target of assay
  • 914histone
  • 914histone modification
  • 459broad histone mark
  • 454narrow histone mark
  • 235control
  • 176transcription factor
  • 56RNA binding protein
  • 13chromatin remodeller
  • 7recombinant protein
  • 5nucleotide modification
  • 3other context
  • 3other post-translational modification
Date released
  • 43August, 2017
  • 28December, 2018
  • 16May, 2021
  • 15November, 2018
  • 15October, 2018
  • 14January, 2019
  • 9December, 2017
  • 7October, 2019
  • 6April, 2019
  • 5February, 2021
  • 5May, 2019
  • 5May, 2024
  • 4June, 2019
  • 3November, 2017
  • 1November, 2019
Available data
  • 163bigWig
  • 159bam
  • 140bed narrowPeak
  • 127fastq
  • 91bigBed narrowPeak
  • 17bed bed3+
  • 9tagAlign
  • 5bed broadPeak
  • 5bigBed broadPeak
Organism
  • 176Homo sapiens
Biosample type
  • 64cell line
  • 55tissue
  • 47in vitro differentiated cells
  • 10primary cell
Organ
  • liver
  • 51blood
  • 51bodily fluid
  • 40connective tissue
  • 19pancreas
  • 17adipose tissue
  • 17heart
  • 10kidney
  • 9epithelium
  • 9vasculature
  • 8blood vessel
  • 6spleen
  • 5artery
  • 3brain
  • 3embryo
  • 1eye
Project
  • 176AMP
Genome assembly (visualization)
  • 162GRCh38
  • 158hg19
Lab
  • 159AMP-T2D consortium
  • 12Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
Audit category:
  • 14inconsistent ontology term
  • 1inconsistent control
Audit category:
  • 23missing controlled_by
Audit category:
  • 10inconsistent control read length
organ_slims!
  • liver
BIOSAMPLE
ASSAY

176 results

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Clear Filters
ChIP-seq
cell line
GM1287851
smooth muscle cell of the coronary artery4
RCC 7860 HIF1a re-expression3
RCC 7860 HIF2a over-expression2
RCC 7860 vector2
tissue
white adipose tissue12
body of pancreas9
islet of Langerhans7
spleen6
heart left ventricle5
in vitro differentiated cells
adipocyte22
embryonic stem cell12
cardiomyocytes3
pancreatic endoderm3
Posterior foregut2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
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