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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1563candidate regulatory elements
  • 1277target gene predictions
  • 970histone modifications
  • 886accessible chromatin
  • 870chromatin state
  • 810binding sites
  • 677gene expression
  • 180eQTL
  • 170differential activity
  • 134variant allelic effects
  • 77Fine-mapped variants
  • 11caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2498February, 2021
  • 2307September, 2022
  • 383May, 2021
  • 363February, 2024
  • 322November, 2021
  • 286September, 2023
  • 283June, 2020
  • 150May, 2020
  • 127August, 2021
  • 119March, 2020
  • 105January, 2022
  • 98October, 2022
  • 84January, 2020
  • 70March, 2023
  • 58February, 2020
  • 56January, 2021
  • 46May, 2022
  • 44November, 2022
  • 40May, 2024
  • 33March, 2025
  • 32August, 2017
  • 32February, 2023
  • 28March, 2024
  • 19April, 2020
  • 14November, 2019
  • 13October, 2019
  • 9August, 2018
  • 8April, 2019
  • 7May, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5800bed bed3+
  • 3557tsv
  • 798bed bed9
  • 530bigWig
  • 108txt
  • 37bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10240Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2295EpiMap
  • 1829ChIP-Atlas
  • 887ENCODE
  • 614DGA
  • 521AMP
  • 420T1D
  • 388T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 144 T2DKP
  • 139GTEx
  • 107T2D
  • 100CMDGA
  • 100eQTLCatalogue
  • 67HPAP
  • 37STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5012tissue
  • 2467primary cell
  • 2335cell line
  • 468in vitro differentiated cells
  • 4stem cell
Organ
  • 2913vasculature
  • 2859bodily fluid
  • 2848blood
  • 2848blood vessel
  • 2658vein
  • 958epithelium
  • 652kidney
  • 480connective tissue
  • 467brain
  • musculature of body
  • 311lung
  • 289intestine
  • 277pancreas
  • 257heart
  • 244limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 163liver
  • 146extraembryonic component
  • 119stomach
  • 109eye
  • 99adipose tissue
  • 89bone element
  • 87mammary gland
  • 84small intestine
  • 83uterus
  • 79artery
  • 78prostate gland
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9588AMP
  • 322ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6635hg19
  • 1813GRCh38
  • 4hg18
organ_slims!
  • musculature of body
BIOSAMPLE
TYPE

10288 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
chromatin state
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201521132
stomach4021131911
kidney2914210161711
brain291632181121
primary cell
monocyte286181154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530413
B cell1710682
endothelial cell3711529122
cell line
HeLa-S355531
A549211911182
H1-hESC13911128
K5627231172
MCF-7962153
in vitro differentiated cells
neural progenitor cell55151047
hematopoietic multipotent progenitor cell1910111011
adipocyte4614611
embryonic stem cell11651
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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