Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 105ChIP-seq
Assay category
  • 105DNA binding
Target of assay
  • 866histone modification
  • 865histone
  • 495transcription factor
  • 441narrow histone mark
  • 423broad histone mark
  • 290control
  • 105RNA binding protein
  • 89recombinant protein
  • 36chromatin remodeller
  • 5other context
  • 5other post-translational modification
Date released
  • 37November, 2017
  • 21November, 2018
  • 6August, 2017
  • 6January, 2019
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 5October, 2018
  • 4April, 2019
  • 4December, 2017
  • 4June, 2019
  • 2December, 2018
  • 1August, 2021
Available data
  • 97bed narrowPeak
  • 97bigWig
  • 94bam
  • 87bigBed narrowPeak
  • 81fastq
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 1tar
Organism
  • 105Homo sapiens
Biosample type
  • 64cell line
  • 20tissue
  • 11in vitro differentiated cells
  • 10primary cell
Organ
  • 58liver
  • 11heart
  • 10blood
  • 10bodily fluid
  • 10connective tissue
  • pancreas
  • 8epithelium
  • 5adipose tissue
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 3kidney
  • 1artery
  • 1eye
Project
  • 105AMP
Genome assembly (visualization)
  • 91GRCh38
  • 91hg19
Lab
  • 94AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 3inconsistent ontology term
Audit category:
  • 2missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
organ_slims!
  • pancreas
BIOSAMPLE
ASSAY

105 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
cell line
HepG254
GM1287810
tissue
left cardiac atrium5
heart left ventricle3
omental fat pad3
subcutaneous adipose tissue2
ascending aorta1
in vitro differentiated cells
embryonic stem cell5
adipocyte4
hepatocyte2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego