Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
51
Gene expression
11
Accessible chromatin
Date released
31
May, 2022
9
June, 2025
6
April, 2025
3
February, 2025
2
August, 2021
2
October, 2024
2
September, 2021
1
February, 2021
1
February, 2023
1
March, 2023
1
March, 2024
1
November, 2021
1
September, 2020
1
September, 2023
Available data
46
h5ad
12
rds
8
tsv
7
mtx
1
bed bed3
1
cloupe
1
tbi
Organism
58
Homo sapiens
Biosample type
56
tissue
7
primary cell
Organ
9
pancreas
7
connective tissue
7
musculature of body
6
adipose tissue
5
liver
vasculature
4
artery
4
blood vessel
4
heart
3
blood
3
bodily fluid
3
kidney
3
lung
2
bone element
2
epithelium
2
intestine
2
mouth
1
bone marrow
1
brain
1
eye
1
large intestine
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
Project
55
AMP
2
LungMap
2
T1D
2
community
1
ENCODE
Genome assembly (visualization)
1
hg19
organ_slims!
vasculature
software_used.software.name!!
r
BIOSAMPLE
TYPE
62 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
islet of Langerhans
2
4
heart
5
liver
4
1
pancreas
4
1
skeletal muscle
3
1
+ See 27 more…
primary cell
islet of Langerhans
1
1
pancreas
1
1
peripheral blood mononuclear cell
1
1
cell
1
endothelial cell
1
+ See 3 more…
See all biosamples