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Embedding Matrix

Click or enter search terms to filter the experiments included in the matrix.

Embeddings type
  • 49Gene expression
  • 11Accessible chromatin
Date released
  • 30May, 2022
  • 8June, 2025
  • 6April, 2025
  • 3February, 2025
  • 2July, 2025
  • 2October, 2024
  • 2September, 2021
  • 1February, 2021
  • 1February, 2023
  • 1March, 2023
  • 1March, 2024
  • 1November, 2021
  • 1September, 2020
  • 1September, 2023
Available data
  • 45h5ad
  • 11rds
  • 8tsv
  • 7mtx
  • 1bed bed3
  • 1cloupe
  • 1tbi
Organism
  • 57Homo sapiens
Biosample type
  • 54tissue
  • 5primary cell
Organ
  • 9musculature of body
  • 7pancreas
  • 6connective tissue
  • 5adipose tissue
  • 5liver
  • vasculature
  • 4artery
  • 4blood vessel
  • 4heart
  • 3kidney
  • 3lung
  • 2bone element
  • 2epithelium
  • 2intestine
  • 2mouth
  • 1bone marrow
  • 1brain
  • 1eye
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1prostate gland
  • 1skin of body
  • 1small intestine
  • 1spleen
  • 1thymus
  • 1tongue
  • 1trachea
  • 1uterus
Project
  • 55AMP
  • 2LungMap
  • 2community
  • 1ENCODE
Genome assembly (visualization)
  • 1hg19
Encyclopedia version
  • 1fusion_consented.snatac.h5ad
  • 1fusion_consented.snrna_post_decontx.h5ad
organ_slims!
  • vasculature
tissue_term_name!
  • blood
BIOSAMPLE
TYPE

60 results

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Clear Filters
Gene expression
Accessible chromatin
tissue
skeletal muscle42
heart5
liver41
islet of Langerhans13
kidney3
primary cell
cell1
endothelial cell1
epithelial cell1
immune system1
stromal cell1
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