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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
165
accessible chromatin
139
target gene predictions
133
candidate regulatory elements
94
gene expression
82
chromatin state
44
binding sites
41
differential activity
37
eQTL
37
histone modifications
27
variant allelic effects
11
Fine-mapped variants
2
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
212
September, 2022
174
February, 2021
69
November, 2021
47
March, 2023
47
May, 2021
41
February, 2024
30
June, 2020
22
January, 2021
19
August, 2021
18
March, 2020
17
May, 2020
17
September, 2023
14
January, 2020
13
October, 2022
11
February, 2020
11
January, 2022
10
August, 2017
8
October, 2019
7
August, 2018
7
November, 2022
4
May, 2022
3
April, 2020
3
November, 2020
2
February, 2023
2
January, 2018
2
May, 2024
2
November, 2019
2
September, 2018
1
April, 2019
1
June, 2021
1
March, 2024
Available data
561
bed bed3+
133
tsv
118
bigWig
70
bed bed9
14
bigBed narrowPeak
7
txt
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
1
bed bed9+
Organism
818
Homo sapiens
Biosample type
406
primary cell
236
tissue
122
cell line
53
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
701
AMP
69
ENCODE
22
T1D
15
KPMP
4
ITG
4
community
3
LungMap
Genome assembly (visualization)
662
hg19
207
GRCh38
2
hg18
BIOSAMPLE
TYPE
818 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
differential activity
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
variant to gene
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
10
1
1
pancreatic ductal cell
6
3
3
1
3
2
1
pancreatic beta cell
8
3
3
3
1
osteoblast
5
2
2
2
1
3
2
+ See 62 more…
tissue
islet of Langerhans
6
1
11
3
2
13
1
1
2
2
2
adipose tissue
2
8
7
3
6
1
4
1
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
subcutaneous adipose tissue
2
2
5
1
1
6
1
3
+ See 29 more…
cell line
EndoC_BH1
8
1
8
3
1
GM23248
1
1
2
1
1
1
MG63
1
1
2
1
1
1
OCI-LY1
1
2
1
1
1
SJSA1
1
1
2
1
1
+ See 25 more…
in vitro differentiated cells
adipocyte
4
6
4
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
pancreatic ductal cell
3
fibroblast
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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