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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
223
candidate regulatory elements
149
target gene predictions
130
chromatin state
63
accessible chromatin
54
histone modifications
47
eQTL
45
Fine-mapped variants
36
gene expression
26
binding sites
20
variant allelic effects
2
differential activity
Date released
338
September, 2022
192
February, 2021
51
March, 2020
34
January, 2020
32
June, 2020
25
January, 2022
24
February, 2020
22
May, 2020
21
May, 2021
11
August, 2017
8
November, 2021
8
October, 2022
6
August, 2021
6
February, 2024
4
March, 2024
4
May, 2019
3
September, 2023
2
September, 2018
1
January, 2018
1
November, 2019
1
November, 2022
Available data
541
bed bed3+
119
bed bed9
97
tsv
30
bigWig
7
bigBed bed9
Organism
794
Homo sapiens
Biosample type
624
tissue
117
cell line
48
primary cell
5
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
787
AMP
8
ENCODE
Genome assembly (visualization)
724
hg19
238
GRCh38
2
hg18
BIOSAMPLE
TYPE
795 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
Fine-mapped variants
gene expression
binding sites
variant allelic effects
differential activity
tissue
brain
29
16
18
2
3
2
1
1
1
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
4
3
1
1
spinal cord
14
8
7
1
1
sigmoid colon
10
7
5
1
+ See 79 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HT-29
2
2
1
1
1
1
SK-N-MC
2
1
1
1
1
2
+ See 20 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
colon epithelial cell
3
3
cardiac fibroblast
3
2
+ See 8 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
white adipose cell
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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