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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
82
target gene predictions
70
accessible chromatin
50
candidate regulatory elements
25
chromatin state
17
gene expression
15
eQTL
12
binding sites
7
histone modifications
6
Fine-mapped variants
5
variant allelic effects
2
differential activity
Date released
69
September, 2022
54
February, 2024
52
February, 2021
24
February, 2023
23
November, 2022
10
June, 2020
8
March, 2020
7
February, 2020
6
August, 2021
6
January, 2020
6
November, 2021
5
May, 2020
5
May, 2021
4
January, 2022
3
March, 2024
3
October, 2022
2
August, 2017
2
September, 2018
1
January, 2018
Available data
230
bed bed3+
42
bigWig
27
tsv
23
bed bed9
1
bigBed bed9
Organism
291
Homo sapiens
Biosample type
177
tissue
78
cell line
29
primary cell
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
285
AMP
6
ENCODE
Genome assembly (visualization)
265
hg19
99
GRCh38
2
hg18
BIOSAMPLE
TYPE
291 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
chromatin state
gene expression
eQTL
binding sites
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
tissue
retina
3
23
6
3
1
1
1
1
1
adipose tissue
8
2
7
6
3
4
1
1
subcutaneous adipose tissue
2
2
1
5
6
3
1
1
pigmented layer of retina
20
omental fat pad
2
2
5
2
2
2
3
+ See 13 more…
cell line
HeLa-S3
55
5
3
1
WERI-Rb-1
1
1
2
1
2
1
adipose tissue derived mesenchymal stem cell
1
1
Ishikawa
1
adipose-derived mesenchymal stem cell
1
+ See 2 more…
primary cell
retinal pigment epithelial cell
1
3
2
1
2
1
iris pigment epithelial cell
1
1
2
1
fibroblast of the conjunctiva
1
2
1
Ishikawa
1
1
1
Muller cell
2
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
white adipose cell
1
See all biosamples
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