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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
76
candidate regulatory elements
53
target gene predictions
41
chromatin state
40
gene expression
38
accessible chromatin
25
eQTL
19
binding sites
16
histone modifications
9
Fine-mapped variants
7
variant allelic effects
6
differential activity
1
caQTL
Date released
112
September, 2022
71
February, 2021
31
February, 2024
20
March, 2020
16
August, 2021
11
June, 2020
8
January, 2022
8
May, 2021
7
February, 2020
7
January, 2020
7
November, 2021
6
May, 2020
5
August, 2017
4
March, 2023
3
March, 2024
3
September, 2018
2
May, 2022
2
May, 2024
2
November, 2019
2
October, 2022
1
January, 2018
1
July, 2020
1
November, 2022
Available data
215
bed bed3+
53
tsv
36
bed bed9
30
bigWig
3
csv
2
bigBed bed9
1
bam
Organism
331
Homo sapiens
Biosample type
215
tissue
70
primary cell
38
cell line
8
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
324
AMP
7
ENCODE
Genome assembly (visualization)
272
hg19
106
GRCh38
4
hg18
BIOSAMPLE
TYPE
331 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
accessible chromatin
eQTL
binding sites
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
caQTL
tissue
liver
13
10
9
1
4
7
1
2
1
1
spleen
15
8
6
1
2
1
1
adipose tissue
7
8
6
3
2
4
1
1
ovary
8
6
4
1
1
1
subcutaneous adipose tissue
2
1
5
2
6
3
1
1
+ See 8 more…
primary cell
hepatocyte
2
3
1
13
8
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
2
1
1
1
3
1
1
pancreatic endothelial cell
1
3
luteal cell
1
1
+ See 4 more…
cell line
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
NT2-D1 cell
1
1
1
1
2
HuH-7.5
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
white adipose cell
1
See all biosamples
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