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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
42
target gene predictions
35
chromatin state
20
accessible chromatin
19
eQTL
18
gene expression
13
binding sites
9
Fine-mapped variants
9
histone modifications
6
variant allelic effects
2
differential activity
Date released
96
September, 2022
67
February, 2021
12
March, 2020
11
June, 2020
8
February, 2020
8
January, 2022
6
August, 2021
6
May, 2020
6
May, 2021
5
January, 2020
3
February, 2024
3
March, 2024
2
August, 2017
2
November, 2021
2
September, 2018
1
January, 2018
1
November, 2019
1
November, 2022
1
October, 2022
Available data
163
bed bed3+
33
bed bed9
31
tsv
8
bigWig
2
bigBed bed9
Organism
242
Homo sapiens
Biosample type
163
tissue
63
cell line
15
primary cell
1
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
240
AMP
2
ENCODE
Genome assembly (visualization)
212
hg19
61
GRCh38
2
hg18
BIOSAMPLE
TYPE
242 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
binding sites
Fine-mapped variants
histone modifications
variant allelic effects
differential activity
tissue
adipose tissue
7
8
6
2
4
3
1
1
tibial nerve
6
3
4
3
2
2
3
2
ovary
8
6
4
1
1
1
subcutaneous adipose tissue
2
1
2
6
5
3
1
1
omental fat pad
5
2
2
2
2
2
3
+ See 8 more…
cell line
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
LNCAP
2
1
1
1
1
+ See 9 more…
primary cell
epithelial cell of prostate
4
3
2
luteal cell
1
1
Leydig cell
1
luminal epithelial cell of prostatic duct
1
mesenchymal stem cell of adipose
1
+ See 1 more…
in vitro differentiated cells
white adipose cell
1
See all biosamples
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