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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
177
candidate regulatory elements
162
target gene predictions
87
chromatin state
36
accessible chromatin
19
binding sites
19
gene expression
18
eQTL
16
histone modifications
6
Fine-mapped variants
6
variant allelic effects
2
differential activity
Date released
242
September, 2022
136
February, 2021
59
February, 2024
23
November, 2021
17
June, 2020
13
May, 2021
11
March, 2020
8
January, 2022
6
August, 2017
6
August, 2021
6
March, 2024
5
February, 2020
4
January, 2020
4
October, 2022
3
May, 2020
2
September, 2018
1
January, 2018
1
November, 2022
Available data
424
bed bed3+
81
bed bed9
28
tsv
18
bigWig
1
bigBed bed9
Organism
548
Homo sapiens
Biosample type
352
tissue
117
cell line
72
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
525
AMP
23
ENCODE
Genome assembly (visualization)
517
hg19
177
GRCh38
2
hg18
BIOSAMPLE
TYPE
548 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
1
3
4
1
sigmoid colon
10
7
5
1
ovary
8
6
4
1
1
1
+ See 29 more…
cell line
HeLa-S3
5
55
3
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
EH
2
1
1
+ See 11 more…
primary cell
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
2
1
1
4
2
colon epithelial cell
3
3
enterocyte
3
3
foreskin melanocyte
4
1
1
+ See 9 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
white adipose cell
1
See all biosamples
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