Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
27
candidate regulatory elements
20
target gene predictions
14
chromatin state
14
eQTL
14
gene expression
9
accessible chromatin
6
Fine-mapped variants
3
variant allelic effects
2
binding sites
2
differential activity
1
histone modifications
Date released
36
September, 2022
27
February, 2021
9
March, 2020
6
August, 2021
5
February, 2020
4
January, 2020
4
January, 2022
4
May, 2021
3
May, 2020
2
August, 2017
2
February, 2024
2
June, 2020
2
November, 2021
2
September, 2018
1
January, 2018
1
March, 2024
1
November, 2022
Available data
66
bed bed3+
23
tsv
12
bed bed9
6
bigWig
1
bigBed bed9
Organism
112
Homo sapiens
Biosample type
105
tissue
3
cell line
3
primary cell
1
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
110
AMP
2
ENCODE
Genome assembly (visualization)
90
hg19
30
GRCh38
2
hg18
organ_slims!
esophagus
intestine
BIOSAMPLE
TYPE
112 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
eQTL
gene expression
accessible chromatin
Fine-mapped variants
variant allelic effects
binding sites
differential activity
histone modifications
tissue
adipose tissue
7
8
6
4
3
2
1
1
ovary
8
6
4
1
1
1
subcutaneous adipose tissue
2
1
6
5
2
3
1
1
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 4 more…
cell line
adipose tissue derived mesenchymal stem cell
1
1
adipose-derived mesenchymal stem cell
1
primary cell
luteal cell
1
1
mesenchymal stem cell of adipose
1
in vitro differentiated cells
white adipose cell
1
See all biosamples
Download