Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
6
ATAC-seq
6
WGBS
2
DNase-seq
2
pCHi-C
1
RNA microarray
1
total RNA-seq
Assay category
73
DNA binding
8
DNA accessibility
6
DNA methylation
1
Transcription
Target of assay
32
histone
32
histone modification
24
control
20
broad histone mark
17
transcription factor
12
narrow histone mark
5
RNA binding protein
Date released
57
August, 2017
23
October, 2018
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
July, 2019
1
June, 2019
1
March, 2020
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
45
bam
44
fastq
28
bigWig
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
2
tsv
1
bedpe bed3+
Organism
90
Homo sapiens
Biosample type
89
tissue
1
in vitro differentiated cells
1
primary cell
Organ
601
liver
457
pancreas
321
epithelium
265
brain
231
heart
226
kidney
209
connective tissue
171
vasculature
165
blood vessel
119
limb
91
adipose tissue
88
musculature of body
85
artery
69
blood
69
bodily fluid
42
eye
42
nerve
25
spleen
23
embryo
22
vein
18
ureter
13
bone element
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
91
AMP
Genome assembly (visualization)
28
hg19
26
GRCh38
Lab
91
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
12
missing controlled_by
replicates.library.nucleic_acid_term_name!
RNA
BIOSAMPLE
ASSAY
91 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
WGBS
DNase-seq
pCHi-C
RNA microarray
total RNA-seq
tissue
subcutaneous abdominal adipose tissue
36
3
omental fat pad
11
1
2
subcutaneous adipose tissue
12
1
1
white adipose tissue
12
adipose tissue
2
3
3
1
+ See 1 more…
in vitro differentiated cells
white fat cell
1
primary cell
mesenchymal stem cell of adipose
1
See all biosamples
Download