Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
390
total RNA-seq
69
ChIP-seq
6
WGBS
3
ATAC-seq
2
DNase-seq
2
small RNA-seq
1
RNA microarray
1
pCHi-C
Assay category
392
Transcription
69
DNA binding
6
DNA methylation
5
DNA accessibility
Target of assay
32
histone
32
histone modification
24
control
20
broad histone mark
13
transcription factor
12
narrow histone mark
5
RNA binding protein
Date released
381
February, 2021
53
August, 2017
23
October, 2018
10
July, 2019
1
August, 2018
1
August, 2021
1
January, 2018
1
June, 2019
1
May, 2023
1
November, 2018
1
October, 2017
Available data
430
bam
413
bigWig
391
tsv
40
fastq
11
bed narrowPeak
9
bigBed narrowPeak
8
tagAlign
3
bed broadPeak
2
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
473
Homo sapiens
Biosample type
473
tissue
1
in vitro differentiated cells
Organ
808
pancreas
775
liver
627
connective tissue
474
adipose tissue
443
epithelium
368
heart
335
kidney
229
vasculature
223
blood vessel
215
brain
151
bone element
137
artery
119
limb
87
musculature of body
67
blood
67
bodily fluid
58
eye
42
nerve
35
embryo
24
spleen
21
vein
19
lung
18
ureter
8
skeleton
4
gonad
4
ovary
1
bone marrow
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
thymus
Project
474
AMP
Genome assembly (visualization)
412
GRCh38
412
hg19
Lab
474
AMP-T2D consortium
Audit category:
8
missing controlled_by
replication_type!
anisogenic
BIOSAMPLE
ASSAY
474 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
WGBS
ATAC-seq
DNase-seq
small RNA-seq
RNA microarray
pCHi-C
tissue
adipose tissue
382
2
3
1
subcutaneous abdominal adipose tissue
36
3
omental fat pad
4
11
1
2
1
subcutaneous adipose tissue
4
12
1
1
1
white adipose tissue
8
in vitro differentiated cells
white fat cell
1
Download