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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
total RNA-seq
4
ChIP-seq
3
ATAC-seq
1
pCHi-C
1
small RNA-seq
Assay category
9
Transcription
4
DNA binding
3
DNA accessibility
Target of assay
4
transcription factor
Date released
5
February, 2021
4
August, 2017
2
February, 2020
2
July, 2019
1
February, 2023
1
March, 2020
1
November, 2019
1
October, 2019
Available data
12
bam
12
bigWig
10
tsv
4
bed bed3+
4
fastq
2
bed narrowPeak
1
bigBed narrowPeak
Organism
17
Homo sapiens
Biosample type
15
tissue
2
primary cell
Organ
426
liver
201
pancreas
169
epithelium
96
brain
68
connective tissue
58
blood
58
bodily fluid
58
kidney
49
vasculature
44
blood vessel
41
heart
22
musculature of body
19
vein
17
adipose tissue
13
embryo
11
artery
9
bone element
8
limb
8
skeleton
7
eye
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
pituitary gland
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
14
hg19
12
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
replication_type!
unreplicated
BIOSAMPLE
ASSAY
17 results
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total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
small RNA-seq
tissue
white adipose tissue
4
adipose tissue
2
1
subcutaneous adipose tissue
3
visceral abdominal adipose tissue
3
adipose tissue(adipose white tissue)
1
+ See 1 more…
primary cell
mesenchymal stem cell of adipose
1
1
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