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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
total RNA-seq
4
ChIP-seq
3
ATAC-seq
1
pCHi-C
1
small RNA-seq
Assay category
9
Transcription
4
DNA binding
3
DNA accessibility
Target of assay
4
transcription factor
Date released
5
February, 2021
4
August, 2017
2
February, 2020
2
July, 2019
1
February, 2023
1
March, 2020
1
November, 2019
1
October, 2019
Available data
12
bam
12
bigWig
10
tsv
4
bed bed3+
4
fastq
2
bed narrowPeak
1
bigBed narrowPeak
Organism
17
Homo sapiens
Biosample type
15
tissue
2
primary cell
Organ
138
pancreas
81
epithelium
71
brain
57
connective tissue
25
heart
19
kidney
17
adipose tissue
16
liver
9
musculature of body
8
bone element
8
skeleton
7
blood vessel
7
vasculature
4
artery
3
eye
3
limb
2
blood
2
bodily fluid
2
embryo
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
nerve
1
ovary
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
17
AMP
Genome assembly (visualization)
14
hg19
12
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
17 results
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total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
small RNA-seq
tissue
white adipose tissue
4
adipose tissue
2
1
subcutaneous adipose tissue
3
visceral abdominal adipose tissue
3
adipose tissue(adipose white tissue)
1
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primary cell
mesenchymal stem cell of adipose
1
1
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