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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 398total RNA-seq
  • 56ChIP-seq
  • 6ATAC-seq
  • 6WGBS
  • 3small RNA-seq
  • 2DNase-seq
  • 2pCHi-C
  • 1RNA microarray
Assay category
  • 401Transcription
  • 56DNA binding
  • 8DNA accessibility
  • 6DNA methylation
Target of assay
  • 32histone
  • 32histone modification
  • 24control
  • 20broad histone mark
  • transcription factor
  • 12narrow histone mark
  • 5RNA binding protein
Date released
  • 386February, 2021
  • 45August, 2017
  • 18October, 2018
  • 12July, 2019
  • 2February, 2020
  • 1August, 2018
  • 1August, 2021
  • 1February, 2023
  • 1January, 2018
  • 1June, 2019
  • 1March, 2020
  • 1May, 2023
  • 1November, 2018
  • 1November, 2019
  • 1October, 2017
  • 1October, 2019
Available data
  • 425bam
  • 408bigWig
  • 401tsv
  • 27fastq
  • 8bed narrowPeak
  • 8tagAlign
  • 5bigBed narrowPeak
  • 3bed broadPeak
  • 2bed bed3+
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 2bigBed broadPeak
  • 1bedpe bed3+
Organism
  • 473Homo sapiens
Biosample type
  • 471tissue
  • 2primary cell
  • 1in vitro differentiated cells
Organ
  • 927pancreas
  • 644connective tissue
  • 515epithelium
  • 474adipose tissue
  • 453liver
  • 376heart
  • 344kidney
  • 283brain
  • 227vasculature
  • 222blood vessel
  • 159bone element
  • 136artery
  • 122limb
  • 96musculature of body
  • 60eye
  • 43nerve
  • 34embryo
  • 22vein
  • 20lung
  • 19spleen
  • 18blood
  • 18bodily fluid
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 474AMP
Genome assembly (visualization)
  • 409hg19
  • 407GRCh38
Lab
  • 474AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
target.investigated_as!
  • transcription factor
BIOSAMPLE
ASSAY

474 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
WGBS
small RNA-seq
DNase-seq
pCHi-C
RNA microarray
tissue
adipose tissue3822331
subcutaneous abdominal adipose tissue363
subcutaneous adipose tissue710111
omental fat pad58112
visceral abdominal adipose tissue3
primary cell
mesenchymal stem cell of adipose11
in vitro differentiated cells
white fat cell1
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