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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
candidate regulatory elements
67
target gene predictions
54
accessible chromatin
54
chromatin state
33
binding sites
29
gene expression
24
histone modifications
9
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
154
September, 2022
103
February, 2021
30
February, 2024
19
June, 2020
16
November, 2021
11
March, 2020
10
August, 2021
6
May, 2021
4
March, 2023
4
May, 2020
4
October, 2022
3
August, 2017
3
January, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
January, 2022
2
May, 2024
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
284
bed bed3+
50
bed bed9
39
bigWig
33
tsv
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
382
Homo sapiens
Biosample type
143
cell line
142
tissue
90
primary cell
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
364
AMP
16
ENCODE
2
T1D
Genome assembly (visualization)
344
hg19
118
GRCh38
2
hg18
organ_slims!
intestine
BIOSAMPLE
TYPE
382 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
cell line
HepG2
2
3
2
2
3
5
GM12864
2
1
1
1
2
1
GM12865
2
1
1
1
2
1
MM.1S
2
2
1
1
1
1
MG63
2
1
1
1
1
1
+ See 25 more…
tissue
adrenal gland
28
17
1
14
1
1
liver
13
10
4
9
1
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
bone tissue
4
femur
2
1
1
+ See 10 more…
primary cell
hepatocyte
2
3
8
1
1
13
4
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
2
1
3
1
1
1
1
cortical cell of adrenal gland
2
3
1
megakaryocyte
2
2
+ See 10 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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