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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
111
ChIP-seq
Assay category
111
DNA binding
Target of assay
111
histone
111
histone modification
64
broad histone mark
46
narrow histone mark
41
control
40
transcription factor
10
RNA binding protein
2
chromatin remodeller
Date released
88
August, 2017
16
June, 2019
6
May, 2019
1
October, 2019
Available data
62
bed narrowPeak
62
bigWig
48
bam
32
tagAlign
26
fastq
23
bigBed narrowPeak
14
bed broadPeak
Organism
111
Homo sapiens
Biosample type
58
tissue
37
in vitro differentiated cells
16
primary cell
Organ
187
brain
151
pancreas
102
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
0
adrenal gland
Project
111
AMP
Genome assembly (visualization)
62
hg19
47
GRCh38
Lab
111
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
BIOSAMPLE
ASSAY
111 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
31
skeletal muscle tissue
19
muscle of leg
6
adipose tissue
1
islet of Langerhans
1
in vitro differentiated cells
adipocyte
37
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
2
skeletal muscle cell
1
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