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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 55total RNA-seq
  • 44ATAC-seq
  • 11ChIP-seq
  • 2DNase-seq
  • 2single cell RNA-seq
Assay category
  • 57Transcription
  • 46DNA accessibility
  • 11DNA binding
Target of assay
  • 5transcription factor
  • 4control
  • 2histone
  • 2histone modification
  • 2narrow histone mark
  • 1RNA binding protein
Date released
  • 66February, 2021
  • 35February, 2023
  • 5May, 2019
  • 3July, 2019
  • 2August, 2021
  • 2June, 2019
  • 1February, 2020
Available data
  • 76bam
  • 64bigWig
  • 57tsv
  • 53bed narrowPeak
  • 6tagAlign
  • 5bigBed narrowPeak
  • 2bed bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
Organism
  • 114Homo sapiens
Biosample type
  • 66cell line
  • 46tissue
  • 2primary cell
Organ
  • 946pancreas
  • 791liver
  • 684connective tissue
  • 524epithelium
  • 491adipose tissue
  • 393heart
  • 354kidney
  • 286brain
  • 236vasculature
  • 230blood vessel
  • 159bone element
  • 141artery
  • limb
  • 97musculature of body
  • 69blood
  • 69bodily fluid
  • 61eye
  • 43nerve
  • 37embryo
  • 25spleen
  • 22vein
  • 20lung
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 114AMP
Genome assembly (visualization)
  • 107GRCh38
  • 72hg19
Lab
  • 114AMP-T2D consortium
organ_slims!
  • limb
BIOSAMPLE
ASSAY

114 results

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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery5286
tissue
coronary artery13652
pulmonary artery2
primary cell
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
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