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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
268
gene expression
268
target gene predictions
244
accessible chromatin
218
candidate regulatory elements
113
chromatin state
104
binding sites
92
differential activity
66
histone modifications
45
variant allelic effects
10
eQTL
6
Fine-mapped variants
4
caQTL
Date released
329
February, 2021
316
September, 2022
155
February, 2024
155
September, 2023
129
November, 2021
49
June, 2020
47
May, 2021
38
March, 2023
33
August, 2021
27
October, 2022
20
January, 2021
20
May, 2020
18
January, 2020
15
February, 2023
15
November, 2022
13
March, 2020
12
February, 2020
10
May, 2024
7
April, 2020
6
August, 2017
6
August, 2018
5
October, 2019
3
January, 2022
3
March, 2024
3
November, 2019
2
May, 2022
1
July, 2020
1
May, 2019
Available data
951
bed bed3+
346
tsv
185
bigWig
107
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1438
Homo sapiens
Biosample type
871
primary cell
369
cell line
141
tissue
56
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1125
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1069
hg19
401
GRCh38
BIOSAMPLE
TYPE
1438 results
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Clear Filters
gene expression
target gene predictions
accessible chromatin
candidate regulatory elements
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
7
15
3
2
1
2
1
2
hepatocyte
13
3
8
2
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
1
2
2
1
1
endothelial cell of umbilical vein
4
2
6
5
2
1
+ See 154 more…
cell line
H1-hESC
8
39
1
1
1
2
1
K562
23
1
7
7
2
1
EndoC_BH1
8
1
8
3
1
GM12878
8
1
2
2
2
1
H9
8
7
1
+ See 54 more…
tissue
coronary artery
1
3
3
3
3
2
2
3
1
pigmented layer of retina
20
tibial artery
1
2
3
3
3
2
2
3
chorionic villus
4
8
4
breast epithelium
3
1
5
2
+ See 27 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
ectodermal cell
1
2
1
+ See 12 more…
stem cell
H1-hESC
1
See all biosamples
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