Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
111
target gene predictions
99
candidate regulatory elements
53
chromatin state
42
accessible chromatin
29
binding sites
25
gene expression
23
histone modifications
6
Fine-mapped variants
5
eQTL
4
differential activity
4
variant allelic effects
2
caQTL
Date released
150
September, 2022
109
February, 2021
51
February, 2024
19
June, 2020
10
September, 2023
9
May, 2021
8
August, 2021
7
March, 2020
6
May, 2020
6
November, 2021
4
February, 2020
4
January, 2020
3
February, 2023
3
January, 2022
3
May, 2024
3
October, 2022
2
January, 2021
2
November, 2019
1
April, 2020
1
August, 2017
1
May, 2019
1
May, 2022
Available data
311
bed bed3+
51
bed bed9
35
tsv
24
bigWig
2
bigBed bed9
1
bed bed9+
Organism
403
Homo sapiens
Biosample type
186
cell line
99
tissue
85
primary cell
32
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
384
AMP
10
KPMP
6
ENCODE
2
T1D
1
LungMap
Genome assembly (visualization)
369
hg19
139
GRCh38
BIOSAMPLE
TYPE
403 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
Fine-mapped variants
eQTL
differential activity
variant allelic effects
caQTL
cell line
H1-hESC
39
1
1
1
2
8
1
H9
8
7
1
MG63
1
2
1
1
1
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 27 more…
tissue
coronary artery
3
3
3
3
1
3
2
2
1
tibial artery
2
3
3
3
1
3
2
2
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
bone tissue
4
+ See 17 more…
primary cell
trophoblast cell
5
7
4
1
1
fibroblast of pulmonary artery
1
2
1
1
2
1
endothelial cell of lymphatic vessel
1
3
3
pulmonary artery endothelial cell
1
2
1
1
1
1
dermis lymphatic vessel endothelial cell
2
2
2
+ See 15 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
Download