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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
262
gene expression
243
accessible chromatin
204
candidate regulatory elements
182
target gene predictions
109
chromatin state
92
differential activity
57
binding sites
45
variant allelic effects
42
histone modifications
10
eQTL
6
Fine-mapped variants
4
caQTL
Date released
310
September, 2022
276
February, 2021
155
September, 2023
130
November, 2021
76
February, 2024
39
May, 2021
38
June, 2020
38
March, 2023
23
August, 2021
22
January, 2021
21
May, 2020
18
January, 2020
15
February, 2023
15
November, 2022
12
February, 2020
12
March, 2020
10
May, 2024
9
October, 2022
7
April, 2020
6
August, 2018
5
January, 2022
5
October, 2019
3
August, 2017
3
March, 2024
3
May, 2022
3
November, 2019
1
July, 2020
1
May, 2019
Available data
776
bed bed3+
340
tsv
195
bigWig
105
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
1
bed bed9+
Organism
1256
Homo sapiens
Biosample type
889
primary cell
233
tissue
103
cell line
31
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
940
AMP
155
KPMP
130
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
891
hg19
331
GRCh38
BIOSAMPLE
TYPE
1256 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
3
7
2
2
1
1
2
hepatocyte
13
8
2
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 161 more…
tissue
placenta
1
26
15
14
1
2
1
coronary artery
1
3
3
3
3
2
2
3
1
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
2
3
chorionic villus
8
4
4
+ See 38 more…
cell line
EndoC_BH1
8
8
1
3
1
MG63
1
2
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
1
2
1
1
1
L1-S8
1
2
1
1
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
+ See 5 more…
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