Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
33
candidate regulatory elements
25
target gene predictions
21
accessible chromatin
20
chromatin state
13
binding sites
10
gene expression
9
histone modifications
8
eQTL
6
Fine-mapped variants
5
variant allelic effects
2
caQTL
2
differential activity
Date released
54
September, 2022
37
February, 2021
8
June, 2020
7
March, 2020
6
January, 2022
6
May, 2020
5
November, 2021
5
September, 2023
4
February, 2020
4
January, 2020
3
February, 2023
3
May, 2021
2
January, 2021
2
March, 2024
2
November, 2019
2
October, 2022
1
April, 2020
1
February, 2024
1
May, 2019
1
May, 2022
Available data
108
bed bed3+
19
bed bed9
18
tsv
14
bigWig
2
bigBed bed9
1
bed bed9+
Organism
154
Homo sapiens
Biosample type
81
tissue
62
primary cell
11
cell line
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
141
AMP
5
ENCODE
5
KPMP
2
T1D
1
LungMap
Genome assembly (visualization)
134
hg19
47
GRCh38
BIOSAMPLE
TYPE
154 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
eQTL
Fine-mapped variants
variant allelic effects
caQTL
differential activity
tissue
coronary artery
3
3
3
3
1
2
3
2
1
ovary
8
6
1
4
1
1
tibial artery
3
2
3
3
1
2
3
2
testis
7
3
1
3
1
1
1
1
abdominal aorta artery
1
+ See 1 more…
primary cell
bronchial epithelial cell
4
2
1
2
2
1
fibroblast of pulmonary artery
2
1
1
1
2
1
pulmonary artery endothelial cell
2
1
1
1
1
1
Afferent / Efferent Arteriole Endothelial Cell
3
2
aortic endothelial cell
2
1
1
+ See 12 more…
cell line
NT2-D1 cell
1
1
1
1
2
smooth muscle cell of the coronary artery
1
1
1
1
NT2/D1
1
See all biosamples
Download