Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
119
accessible chromatin
119
candidate regulatory elements
111
target gene predictions
89
gene expression
71
chromatin state
47
binding sites
41
histone modifications
34
eQTL
23
variant allelic effects
20
differential activity
15
Fine-mapped variants
5
caQTL
2
pQTL
Date released
181
September, 2022
143
February, 2021
54
November, 2021
47
February, 2024
26
June, 2020
26
May, 2024
25
March, 2020
22
September, 2023
21
August, 2021
21
May, 2021
17
May, 2020
16
January, 2020
15
February, 2020
13
October, 2022
11
March, 2023
10
August, 2017
10
January, 2022
7
November, 2022
5
May, 2022
4
February, 2023
3
April, 2020
3
November, 2019
3
November, 2020
3
September, 2018
2
January, 2021
2
October, 2019
1
August, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
May, 2019
Available data
477
bed bed3+
117
tsv
85
bigWig
61
bed bed9
7
txt
5
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
696
Homo sapiens
Biosample type
382
primary cell
195
tissue
61
cell line
57
in vitro differentiated cells
1
stem cell
Organ
976
epithelium
652
kidney
481
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
274
vasculature
260
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
162
liver
146
extraembryonic component
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
29
lymphatic vessel
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
611
AMP
54
ENCODE
20
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
563
hg19
221
GRCh38
4
hg18
organ_slims!
small intestine
stomach
BIOSAMPLE
TYPE
696 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
3
6
3
1
2
6
hepatocyte
8
2
4
14
1
1
4
2
pericyte cell
10
3
11
2
1
osteoblast
5
2
2
2
1
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 53 more…
tissue
liver
4
13
10
1
9
1
2
7
1
1
adipose tissue
2
7
8
3
6
1
4
1
coronary artery
3
3
3
1
3
2
2
3
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
tibial artery
3
3
2
1
3
2
2
3
+ See 12 more…
cell line
HepG2
2
2
3
2
3
5
GM23248
1
2
1
1
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 11 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
hepatocyte
2
1
1
hepatocyte(AFP)
3
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download