Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
108
target gene predictions
91
candidate regulatory elements
49
chromatin state
26
accessible chromatin
20
binding sites
19
gene expression
17
histone modifications
6
Fine-mapped variants
5
eQTL
4
variant allelic effects
2
caQTL
2
differential activity
Date released
141
September, 2022
81
February, 2021
51
February, 2024
15
June, 2020
10
May, 2021
8
August, 2021
8
March, 2020
6
May, 2020
5
September, 2023
4
February, 2020
4
January, 2020
3
February, 2023
3
January, 2022
3
November, 2021
2
November, 2019
2
October, 2022
1
August, 2017
1
March, 2024
1
May, 2019
Available data
269
bed bed3+
48
bed bed9
27
tsv
12
bigWig
2
bigBed bed9
Organism
349
Homo sapiens
Biosample type
135
tissue
131
cell line
52
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
341
AMP
5
KPMP
3
ENCODE
Genome assembly (visualization)
323
hg19
122
GRCh38
BIOSAMPLE
TYPE
349 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
Fine-mapped variants
eQTL
variant allelic effects
caQTL
differential activity
tissue
thymus
14
20
11
1
1
1
coronary artery
3
3
3
3
1
3
2
2
1
tibial artery
2
3
3
3
1
3
2
2
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
+ See 8 more…
cell line
H1-hESC
39
1
1
1
2
8
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 15 more…
primary cell
trophoblast cell
5
7
4
1
1
fibroblast of pulmonary artery
1
2
1
1
2
1
pulmonary artery endothelial cell
1
2
1
1
1
1
Afferent / Efferent Arteriole Endothelial Cell
3
2
aortic endothelial cell
2
1
1
+ See 6 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
See all biosamples
Download