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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
259
gene expression
225
accessible chromatin
144
target gene predictions
142
candidate regulatory elements
92
differential activity
70
chromatin state
47
binding sites
45
variant allelic effects
31
histone modifications
12
eQTL
6
Fine-mapped variants
4
caQTL
Date released
221
February, 2021
196
September, 2022
155
September, 2023
131
November, 2021
76
February, 2024
38
March, 2023
37
May, 2021
29
June, 2020
23
August, 2021
20
January, 2021
20
May, 2020
18
January, 2020
15
February, 2023
15
November, 2022
14
March, 2020
12
February, 2020
10
May, 2024
7
April, 2020
7
January, 2022
7
October, 2022
6
August, 2018
5
October, 2019
4
March, 2024
4
November, 2019
3
August, 2017
2
May, 2022
1
July, 2020
1
May, 2019
Available data
637
bed bed3+
337
tsv
186
bigWig
78
txt
67
bed bed9
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1077
Homo sapiens
Biosample type
844
primary cell
160
tissue
47
cell line
26
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
762
AMP
155
KPMP
131
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
713
hg19
289
GRCh38
BIOSAMPLE
TYPE
1077 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
3
2
2
1
1
2
hepatocyte
13
8
3
2
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 149 more…
tissue
spleen
1
2
8
15
6
1
1
coronary artery
1
3
3
3
3
2
2
3
1
pigmented layer of retina
20
tibial artery
1
3
2
3
3
2
2
3
breast epithelium
1
3
5
2
+ See 24 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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