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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
gene expression
171
accessible chromatin
108
candidate regulatory elements
105
target gene predictions
65
differential activity
60
chromatin state
44
binding sites
38
variant allelic effects
28
histone modifications
8
eQTL
6
Fine-mapped variants
4
caQTL
Date released
198
February, 2021
162
September, 2022
155
September, 2023
110
November, 2021
55
February, 2024
26
June, 2020
23
August, 2021
19
May, 2020
18
January, 2020
15
November, 2022
14
February, 2023
12
February, 2020
11
March, 2020
11
May, 2021
7
April, 2020
7
October, 2022
4
March, 2023
3
August, 2017
3
January, 2022
2
January, 2021
2
March, 2024
2
May, 2022
2
November, 2019
1
July, 2020
1
May, 2019
Available data
499
bed bed3+
285
tsv
138
bigWig
78
txt
57
bed bed9
4
bigBed bed9
3
csv
1
bigBed narrowPeak
Organism
863
Homo sapiens
Biosample type
720
primary cell
96
tissue
24
cell line
23
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
589
AMP
155
KPMP
110
ENCODE
7
LungMap
2
T1D
Genome assembly (visualization)
563
hg19
230
GRCh38
organ_slims!
pancreas
spinal cord
BIOSAMPLE
TYPE
863 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 137 more…
tissue
coronary artery
1
3
3
3
3
2
2
3
1
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
2
3
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
+ See 13 more…
cell line
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
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