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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
Assay category
66
DNA binding
Target of assay
343
transcription factor
123
histone modification
122
histone
117
control
82
recombinant protein
66
narrow histone mark
59
RNA binding protein
56
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
27
May, 2020
13
August, 2017
7
December, 2017
7
November, 2017
6
October, 2019
4
August, 2021
2
May, 2019
Available data
58
bigWig
57
bed narrowPeak
56
bam
40
tagAlign
20
bigBed narrowPeak
19
fastq
6
bed broadPeak
6
bigBed broadPeak
2
bed bed3+
Organism
66
Homo sapiens
Biosample type
50
tissue
9
cell line
5
in vitro differentiated cells
2
primary cell
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
0
esophagus
Project
66
AMP
Genome assembly (visualization)
58
hg19
47
GRCh38
Lab
64
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
tissue
liver
42
tibial artery
4
coronary artery
2
right lobe of liver
2
cell line
HepG2
9
in vitro differentiated cells
hepatocyte
5
primary cell
hepatocyte
2
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