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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
42
candidate regulatory elements
38
accessible chromatin
34
target gene predictions
33
gene expression
31
chromatin state
22
binding sites
20
histone modifications
13
eQTL
9
Fine-mapped variants
9
variant allelic effects
6
differential activity
3
caQTL
Date released
76
September, 2022
48
February, 2021
29
February, 2024
17
March, 2020
10
August, 2021
10
June, 2020
10
May, 2020
9
January, 2020
6
February, 2020
6
May, 2021
5
November, 2021
5
September, 2023
4
August, 2017
4
January, 2022
4
March, 2023
3
February, 2023
3
November, 2019
3
October, 2022
2
May, 2022
2
May, 2024
1
July, 2020
1
March, 2024
1
May, 2019
1
September, 2018
Available data
169
bed bed3+
45
tsv
33
bigWig
27
bed bed9
5
bigBed bed9
3
csv
1
bam
Organism
260
Homo sapiens
Biosample type
114
primary cell
101
tissue
34
cell line
11
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
250
AMP
5
ENCODE
5
KPMP
Genome assembly (visualization)
211
hg19
96
GRCh38
2
hg18
BIOSAMPLE
TYPE
260 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
primary cell
hepatocyte
2
8
3
13
1
1
4
2
endothelial cell of umbilical vein
6
2
4
5
2
1
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
2
3
1
1
1
1
1
fibroblast of pulmonary artery
2
1
1
1
2
1
+ See 7 more…
tissue
liver
13
4
10
1
9
1
2
7
1
1
coronary artery
3
3
3
1
3
2
3
2
1
tibial artery
3
3
2
1
3
2
3
2
right lobe of liver
2
1
1
1
1
3
abdominal aorta artery
1
+ See 2 more…
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
smooth muscle cell of the coronary artery
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
+ See 1 more…
in vitro differentiated cells
hepatocyte
2
1
1
olfactory neurosphere cell line
1
1
1
1
hepatocyte(AFP)
3
See all biosamples
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