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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
61
total RNA-seq
46
ATAC-seq
6
DNase-seq
2
single cell RNA-seq
Assay category
68
DNA binding
63
Transcription
52
DNA accessibility
Target of assay
44
histone
44
histone modification
30
broad histone mark
20
control
14
narrow histone mark
5
transcription factor
RNA binding protein
Date released
68
October, 2019
66
February, 2021
35
February, 2023
4
May, 2019
3
February, 2020
3
July, 2019
2
August, 2021
2
June, 2019
Available data
143
bam
115
bigWig
100
bed narrowPeak
63
tsv
50
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
6
tagAlign
Organism
183
Homo sapiens
Biosample type
115
tissue
66
cell line
2
primary cell
Organ
937
pancreas
674
connective tissue
651
liver
516
epithelium
486
adipose tissue
382
heart
344
kidney
283
brain
231
vasculature
226
blood vessel
159
bone element
140
artery
122
limb
96
musculature of body
60
eye
59
blood
59
bodily fluid
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
183
AMP
Genome assembly (visualization)
158
GRCh38
123
hg19
Lab
183
AMP-T2D consortium
organ_slims!
thymus
target.investigated_as!
RNA binding protein
recombinant protein
BIOSAMPLE
ASSAY
183 results
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ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery
4
1
36
2
tibial nerve
35
5
1
2
tibial artery
23
1
1
2
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
6
52
8
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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