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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
79
accessible chromatin
75
target gene predictions
71
candidate regulatory elements
56
gene expression
45
chromatin state
35
differential activity
21
eQTL
15
variant allelic effects
11
Fine-mapped variants
11
binding sites
11
histone modifications
2
caQTL
2
sQTL
2
variant to gene
Date released
122
September, 2022
64
February, 2021
47
March, 2023
36
May, 2021
25
February, 2024
22
November, 2021
20
January, 2021
16
March, 2020
11
May, 2020
8
August, 2021
8
January, 2020
8
January, 2022
8
June, 2020
7
August, 2018
6
February, 2020
6
October, 2019
5
September, 2023
4
August, 2017
4
February, 2023
4
November, 2019
1
April, 2019
1
January, 2018
1
June, 2021
1
May, 2019
1
October, 2022
Available data
269
bed bed3+
92
tsv
68
bigWig
40
bed bed9
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
436
Homo sapiens
Biosample type
236
tissue
159
primary cell
38
cell line
3
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
387
AMP
22
ENCODE
20
T1D
5
KPMP
2
community
Genome assembly (visualization)
329
hg19
113
GRCh38
organ_slims!
bodily fluid
BIOSAMPLE
TYPE
436 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
Fine-mapped variants
binding sites
histone modifications
caQTL
sQTL
variant to gene
tissue
small intestine
1
17
29
15
1
islet of Langerhans
6
1
11
3
13
1
2
2
1
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
3
3
1
3
2
2
3
1
+ See 13 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 20 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
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