Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 11accessible chromatin
  • 11target gene predictions
  • 10candidate regulatory elements
  • 10differential activity
  • 8chromatin state
  • 8gene expression
  • 6Fine-mapped variants
  • 6binding sites
  • 5eQTL
  • 5histone modifications
  • 4variant allelic effects
  • 2caQTL
Date released
  • 21September, 2022
  • 15February, 2021
  • 8May, 2026
  • 6March, 2020
  • 5July, 2026
  • 5May, 2020
  • 5September, 2023
  • 4February, 2020
  • 4January, 2020
  • 3February, 2023
  • 3January, 2022
  • 3June, 2020
  • 2November, 2019
  • 1May, 2019
  • 1October, 2022
Available data
  • 52bed bed3+
  • 16tsv
  • 9bigWig
  • 8bed bed9
  • 2bigBed bed9
Organism
  • 86Homo sapiens
Collection Tags
  • 18EpiMap
  • 12ChIP-Atlas
  • 10GTEx
  • 8ENCODE
  • 8pyxis
  • 5DGA
  • 5ENCODE-rE2G
  • 5KPMP
  • 3AMP
  • 3CMDGA
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
Biosample type
  • 46tissue
  • 36primary cell
  • 4cell line
Organ
  • 3361blood
  • 2898vasculature
  • 2858blood vessel
  • 2849bodily fluid
  • 2658vein
  • 893epithelium
  • 892brain
  • 756kidney
  • 487connective tissue
  • 481heart
  • 433lung
  • 377musculature of body
  • 344intestine
  • 305pancreas
  • 286skin of body
  • 241limb
  • 236liver
  • 218large intestine
  • 210embryo
  • 171extraembryonic component
  • 161eye
  • 139adipose tissue
  • 134stomach
  • 111muscle organ
  • 106bone element
  • 99mammary gland
  • 96adrenal gland
  • 96placenta
  • 94small intestine
  • 92thymus
  • 90uterus
  • 86artery
  • 85prostate gland
  • 73ureter
  • 63penis
  • 62gonad
  • 62spleen
  • 61lymph node
  • 60__MARKER__
  • 48spinal cord
  • 46esophagus
  • 45thyroid gland
  • 31testis
  • 30ovary
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21mouth
  • 20lymphatic vessel
  • 15bronchus
  • 14breast
  • 13bone marrow
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 81AMP
  • 5KPMP
Genome assembly (visualization)
  • 58hg19
  • 33GRCh38
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

86 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
gene expression
Fine-mapped variants
binding sites
eQTL
histone modifications
variant allelic effects
caQTL
tissue
coronary artery343313221
tibial artery35331322
abdominal aorta artery1
circle of Willis1
primary cell
fibroblast of pulmonary artery112121
pulmonary artery endothelial cell112111
Afferent / Efferent Arteriole Endothelial Cell23
aortic endothelial cell211
pericyte3
cell line
smooth muscle cell of the coronary artery1111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego