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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 56total RNA-seq
  • 45ATAC-seq
  • 29ChIP-seq
  • 4DNase-seq
  • 2single cell RNA-seq
Assay category
  • 58Transcription
  • 49DNA accessibility
  • 29DNA binding
Target of assay
  • 20histone
  • 20histone modification
  • 14broad histone mark
  • 9control
  • 6narrow histone mark
  • transcription factor
  • 1RNA binding protein
Date released
  • 62February, 2021
  • 35February, 2023
  • 26October, 2019
  • 4May, 2019
  • 3July, 2019
  • 2August, 2021
  • 2February, 2020
  • 2June, 2019
Available data
  • 97bam
  • 80bigWig
  • 69bed narrowPeak
  • 58tsv
  • 24bigBed narrowPeak
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 2tagAlign
Organism
  • 136Homo sapiens
Biosample type
  • 72tissue
  • 62cell line
  • 2primary cell
Organ
  • 927pancreas
  • 644connective tissue
  • 515epithelium
  • 474adipose tissue
  • 453liver
  • 376heart
  • 344kidney
  • 283brain
  • 227vasculature
  • 222blood vessel
  • 159bone element
  • 136artery
  • 122limb
  • 96musculature of body
  • 60eye
  • 43nerve
  • 34embryo
  • 22vein
  • 20lung
  • 19spleen
  • 18blood
  • 18bodily fluid
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 136AMP
Genome assembly (visualization)
  • 123GRCh38
  • 88hg19
Lab
  • 136AMP-T2D consortium
target.investigated_as!
  • transcription factor
BIOSAMPLE
ASSAY

136 results

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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery13642
tibial artery11232
pulmonary artery2
cell line
smooth muscle cell of the coronary artery5282
primary cell
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
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