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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
354
candidate regulatory elements
299
target gene predictions
282
accessible chromatin
278
gene expression
198
chromatin state
104
binding sites
101
histone modifications
92
differential activity
63
variant allelic effects
45
Fine-mapped variants
39
eQTL
2
caQTL
Date released
532
September, 2022
430
February, 2021
158
September, 2023
125
November, 2021
104
February, 2024
63
June, 2020
53
March, 2020
52
May, 2021
48
January, 2020
42
May, 2020
38
March, 2023
33
February, 2020
30
October, 2022
25
August, 2021
20
January, 2021
20
January, 2022
15
November, 2022
12
February, 2023
11
August, 2017
10
May, 2024
7
April, 2020
6
August, 2018
6
May, 2019
5
March, 2024
5
October, 2019
4
November, 2019
2
May, 2022
1
July, 2020
Available data
1205
bed bed3+
409
tsv
208
bigWig
187
bed bed9
78
txt
14
bigBed narrowPeak
12
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1856
Homo sapiens
Biosample type
858
primary cell
649
tissue
319
cell line
30
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1548
AMP
155
KPMP
125
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1457
hg19
519
GRCh38
organ_slims!
thyroid gland
BIOSAMPLE
TYPE
1857 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
chromatin state
binding sites
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
3
7
15
9
2
1
2
1
2
hepatocyte
2
3
8
13
1
1
4
2
epithelial cell of proximal tubule
2
1
1
16
1
1
1
glomerular endothelial cell
2
1
2
14
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 154 more…
tissue
brain
29
16
2
1
18
1
3
1
2
muscle of arm
33
16
1
16
1
muscle of leg
27
14
2
15
tibial nerve
6
3
3
2
4
2
3
2
caudate nucleus
5
3
2
1
4
1
1
3
2
+ See 101 more…
cell line
K562
7
23
1
7
2
1
EndoC_BH1
1
8
8
3
1
GM12878
2
8
1
2
2
1
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
+ See 48 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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