Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
58
target gene predictions
48
candidate regulatory elements
45
binding sites
27
chromatin state
24
histone modifications
13
accessible chromatin
3
eQTL
2
gene expression
Date released
75
September, 2022
73
February, 2021
28
February, 2024
19
October, 2022
13
June, 2020
5
May, 2021
2
August, 2017
2
August, 2021
2
March, 2024
1
January, 2022
Available data
190
bed bed3+
25
bed bed9
2
tsv
Organism
220
Homo sapiens
Biosample type
195
cell line
16
tissue
9
primary cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
nose
1
pericardium
Project
220
AMP
Genome assembly (visualization)
217
hg19
54
GRCh38
organ_slims!
nose
ovary
BIOSAMPLE
TYPE
220 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
cell line
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 23 more…
tissue
breast epithelium
3
5
2
1
blood
2
breast
1
breast - mammary tissue
1
whole blood
1
primary cell
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
See all biosamples
Download