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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
122
candidate regulatory elements
102
target gene predictions
67
binding sites
62
chromatin state
40
histone modifications
29
accessible chromatin
5
eQTL
3
gene expression
2
variant allelic effects
Date released
177
September, 2022
147
February, 2021
30
February, 2024
23
October, 2022
22
June, 2020
12
November, 2021
9
May, 2021
3
August, 2017
3
January, 2022
3
March, 2024
2
August, 2021
1
April, 2020
Available data
365
bed bed3+
59
bed bed9
7
bigWig
3
tsv
Organism
432
Homo sapiens
Biosample type
265
cell line
130
primary cell
28
tissue
9
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
419
AMP
12
ENCODE
1
LungMap
Genome assembly (visualization)
426
hg19
102
GRCh38
BIOSAMPLE
TYPE
432 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
variant allelic effects
cell line
K562
7
23
2
7
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 43 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
1
3
2
2
1
foreskin fibroblast
6
2
4
1
2
1
bronchial epithelial cell
4
2
2
2
1
1
fibroblast of dermis
4
4
1
3
+ See 14 more…
tissue
lower leg skin
6
2
2
skin of body
1
1
1
3
suprapubic skin
3
blood
2
skin of forearm
1
1
+ See 4 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
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