Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
180
candidate regulatory elements
161
target gene predictions
131
accessible chromatin
104
chromatin state
94
binding sites
85
gene expression
56
histone modifications
32
differential activity
29
eQTL
29
variant allelic effects
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
258
September, 2022
224
February, 2021
63
February, 2024
54
November, 2021
52
September, 2023
37
June, 2020
33
October, 2022
23
January, 2020
23
May, 2020
23
May, 2021
21
March, 2020
14
August, 2021
14
February, 2020
13
May, 2024
11
March, 2023
10
August, 2017
9
January, 2022
7
November, 2022
6
April, 2020
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
666
bed bed3+
129
tsv
94
bed bed9
82
bigWig
10
bigBed bed9
9
txt
1
bigBed narrowPeak
Organism
922
Homo sapiens
Biosample type
451
primary cell
237
cell line
181
tissue
52
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
804
AMP
54
ENCODE
50
KPMP
6
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
788
hg19
263
GRCh38
2
hg18
organ_slims!
ovary
BIOSAMPLE
TYPE
922 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
endothelial cell of umbilical vein
6
4
2
5
2
1
osteoblast
2
2
5
1
3
2
2
endothelial cell of hepatic sinusoid
6
6
4
+ See 73 more…
cell line
K562
7
23
1
7
2
1
GM12878
2
8
1
2
2
1
GM06990
2
1
1
1
2
1
GM19240
1
2
1
1
2
1
HAP-1
2
2
1
1
1
1
+ See 39 more…
tissue
adipose tissue
7
8
2
6
1
3
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
1
6
1
3
tibial artery
3
2
3
3
1
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
dermis microvascular lymphatic vessel endothelial cell
1
1
fibroblast
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download