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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
228
accessible chromatin
201
target gene predictions
192
candidate regulatory elements
100
chromatin state
99
binding sites
92
differential activity
60
histone modifications
41
variant allelic effects
8
eQTL
2
caQTL
Date released
308
February, 2021
286
September, 2022
155
September, 2023
123
November, 2021
104
February, 2024
43
June, 2020
42
May, 2021
38
March, 2023
29
October, 2022
25
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
August, 2017
5
March, 2024
5
October, 2019
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
824
bed bed3+
327
tsv
174
bigWig
95
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1279
Homo sapiens
Biosample type
861
primary cell
299
cell line
89
tissue
30
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
embryo
207
blood
204
blood vessel
204
skin of body
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
972
AMP
155
KPMP
123
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
924
hg19
306
GRCh38
organ_slims!
embryo
large intestine
BIOSAMPLE
TYPE
1279 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
3
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 152 more…
cell line
K562
1
23
7
7
2
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
1
2
1
GM19240
1
2
1
1
2
1
+ See 51 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
lower leg skin
2
6
2
skin of body
1
1
1
3
+ See 24 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
+ See 6 more…
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