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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
226
accessible chromatin
191
target gene predictions
173
candidate regulatory elements
92
differential activity
89
binding sites
89
chromatin state
53
histone modifications
41
variant allelic effects
5
eQTL
2
caQTL
Date released
277
February, 2021
253
September, 2022
155
September, 2023
128
November, 2021
104
February, 2024
39
May, 2021
38
June, 2020
38
March, 2023
25
August, 2021
25
October, 2022
20
January, 2021
16
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
7
April, 2020
7
March, 2020
6
August, 2018
5
August, 2017
5
October, 2019
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
776
bed bed3+
325
tsv
177
bigWig
84
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1215
Homo sapiens
Biosample type
839
primary cell
238
cell line
112
tissue
26
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
903
AMP
155
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
865
hg19
307
GRCh38
organ_slims!
ureter
BIOSAMPLE
TYPE
1215 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
binding sites
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
3
2
1
2
1
2
hepatocyte
13
8
3
2
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
2
5
1
+ See 149 more…
cell line
K562
1
23
7
2
7
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
1
2
1
2
1
1
+ See 34 more…
tissue
thymus
1
14
20
1
11
1
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
blood
2
+ See 18 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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