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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
93
candidate regulatory elements
85
target gene predictions
66
binding sites
57
chromatin state
48
accessible chromatin
36
gene expression
32
histone modifications
18
differential activity
15
variant allelic effects
9
Fine-mapped variants
8
eQTL
3
caQTL
Date released
141
September, 2022
117
February, 2021
45
February, 2024
35
September, 2023
23
October, 2022
18
June, 2020
16
January, 2020
15
May, 2020
12
March, 2020
7
May, 2021
6
November, 2021
5
February, 2020
4
February, 2023
4
March, 2023
3
April, 2020
3
August, 2017
3
August, 2021
3
January, 2022
3
May, 2024
3
November, 2019
2
October, 2019
1
March, 2024
1
May, 2019
Available data
343
bed bed3+
64
tsv
54
bed bed9
31
bigWig
8
bigBed bed9
2
txt
Organism
470
Homo sapiens
Biosample type
206
cell line
176
primary cell
86
tissue
2
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
426
AMP
35
KPMP
6
ENCODE
3
LungMap
Genome assembly (visualization)
408
hg19
140
GRCh38
organ_slims!
lung
penis
BIOSAMPLE
TYPE
470 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
accessible chromatin
gene expression
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
cell line
K562
7
23
2
7
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 27 more…
primary cell
endothelial cell of umbilical vein
6
4
2
5
2
1
endothelial cell of hepatic sinusoid
6
6
4
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
2
1
1
1
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 28 more…
tissue
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
3
2
3
3
1
2
3
2
ascending aorta
4
2
3
1
1
1
3
1
aorta
4
4
4
1
thoracic aorta
4
2
3
1
1
+ See 5 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
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