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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 54ChIP-seq
  • 8snATAC-seq
  • 1ATAC-seq
Assay category
  • 54DNA binding
  • 9DNA accessibility
Target of assay
  • 51transcription factor
  • 10RNA binding protein
  • 10chromatin remodeller
  • control
  • 1histone
  • 1histone modification
  • 1narrow histone mark
Date released
  • 27December, 2018
  • 15January, 2019
  • 12November, 2018
  • 8January, 2021
  • 1January, 2018
Available data
  • 55bigWig
  • 54bam
  • 54bed narrowPeak
  • 54bigBed narrowPeak
  • 54fastq
Organism
  • 63Homo sapiens
Biosample type
  • 55cell line
  • 8primary cell
Organ
  • 893pancreas
  • 683liver
  • 649connective tissue
  • 494epithelium
  • 467adipose tissue
  • 373heart
  • 342kidney
  • 255brain
  • 214vasculature
  • 209blood vessel
  • 159bone element
  • 132artery
  • 105limb
  • 90musculature of body
  • 63blood
  • 63bodily fluid
  • 60eye
  • 32nerve
  • 30embryo
  • 20lung
  • 20vein
  • 18ureter
  • 17spleen
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 55AMP
  • 8T1D
Genome assembly (visualization)
  • 55hg19
  • 54GRCh38
Lab
  • 55AMP-T2D consortium
  • 8Kyle Gaulton, UCSD
Audit category:
  • 1inconsistent control
target.investigated_as!
  • control
BIOSAMPLE
ASSAY

63 results

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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878541
primary cell
peripheral blood mononuclear cell8
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