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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
151
target gene predictions
149
candidate regulatory elements
110
accessible chromatin
93
chromatin state
79
binding sites
57
gene expression
52
histone modifications
29
eQTL
22
variant allelic effects
15
Fine-mapped variants
15
differential activity
4
caQTL
3
pQTL
Date released
231
September, 2022
200
February, 2021
50
November, 2021
47
February, 2024
34
June, 2020
31
October, 2022
22
May, 2021
20
March, 2020
17
January, 2020
17
May, 2020
17
September, 2023
15
August, 2021
13
February, 2020
9
August, 2017
9
January, 2022
7
March, 2023
7
November, 2022
4
February, 2023
4
October, 2019
3
April, 2020
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
580
bed bed3+
85
tsv
84
bed bed9
64
bigWig
8
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
779
Homo sapiens
Biosample type
296
primary cell
240
cell line
192
tissue
50
in vitro differentiated cells
1
stem cell
Organ
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
703
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
692
hg19
218
GRCh38
2
hg18
organ_slims!
epithelium
BIOSAMPLE
TYPE
779 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
osteoblast
2
2
5
1
3
2
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
2
6
1
1
4
2
+ See 48 more…
cell line
K562
23
7
1
7
2
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
1
2
1
GM19240
2
1
1
1
2
1
HAP-1
2
2
1
1
1
1
+ See 39 more…
tissue
adipose tissue
8
7
2
6
1
3
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
1
3
1
tibial artery
2
3
3
3
1
2
2
3
omental fat pad
2
5
2
2
2
2
3
+ See 19 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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