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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
311
accessible chromatin
310
gene expression
223
target gene predictions
214
candidate regulatory elements
125
chromatin state
107
differential activity
78
binding sites
63
variant allelic effects
55
histone modifications
32
eQTL
18
Fine-mapped variants
6
caQTL
2
pQTL
Date released
329
February, 2021
325
September, 2022
177
November, 2021
172
September, 2023
95
February, 2024
53
May, 2021
48
June, 2020
45
March, 2023
35
August, 2021
32
January, 2020
32
May, 2020
29
March, 2020
23
February, 2020
22
January, 2021
22
November, 2022
19
October, 2022
16
February, 2023
10
April, 2020
10
August, 2017
10
January, 2022
9
October, 2019
7
August, 2018
5
May, 2022
4
November, 2019
3
March, 2024
3
November, 2020
2
May, 2024
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
May, 2019
Available data
959
bed bed3+
413
tsv
240
bigWig
115
bed bed9
85
txt
15
bigBed narrowPeak
10
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1544
Homo sapiens
Biosample type
1110
primary cell
276
tissue
81
cell line
76
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1157
AMP
177
ENCODE
170
KPMP
22
T1D
10
LungMap
4
ITG
4
community
Genome assembly (visualization)
1107
hg19
410
GRCh38
2
hg18
organ_slims!
lymph node
BIOSAMPLE
TYPE
1544 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
15
9
7
2
2
1
1
2
hepatocyte
8
13
3
1
1
1
2
4
fibroblast
16
4
1
6
2
epithelial cell of proximal tubule
1
16
1
2
1
1
1
pericyte cell
10
10
1
1
+ See 198 more…
tissue
adipose tissue
2
3
8
7
6
1
1
4
spinal cord
1
8
14
7
1
coronary artery
3
1
3
3
3
2
2
3
1
subcutaneous adipose tissue
2
5
2
1
1
1
6
3
pigmented layer of retina
20
+ See 37 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
keratinocyte
3
1
+ See 20 more…
in vitro differentiated cells
adipocyte
4
1
6
4
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
1
2
1
+ See 17 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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