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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
117
candidate regulatory elements
114
accessible chromatin
103
target gene predictions
75
chromatin state
62
gene expression
47
binding sites
32
histone modifications
27
eQTL
24
variant allelic effects
18
differential activity
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
177
September, 2022
146
February, 2021
53
November, 2021
33
February, 2024
25
June, 2020
22
March, 2020
20
January, 2020
20
May, 2020
19
May, 2021
17
September, 2023
14
February, 2020
13
October, 2022
11
August, 2021
11
March, 2023
9
January, 2022
8
August, 2017
7
November, 2022
5
April, 2020
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
451
bed bed3+
92
tsv
77
bigWig
67
bed bed9
10
bigBed bed9
6
txt
1
bigBed narrowPeak
Organism
640
Homo sapiens
Biosample type
363
primary cell
189
tissue
50
in vitro differentiated cells
37
cell line
1
stem cell
Organ
949
epithelium
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
559
AMP
53
ENCODE
15
KPMP
5
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
544
hg19
193
GRCh38
2
hg18
organ_slims!
kidney
BIOSAMPLE
TYPE
640 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
2
4
5
2
1
osteoblast
2
5
2
1
2
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 57 more…
tissue
adipose tissue
7
2
8
6
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
tibial artery
3
3
2
3
1
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 18 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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